Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797875.1_cds_XP_016457046.1_5038
CDS Infomation

[gene=LOC107780934] [db_xref=GeneID:107780934] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016457046.1] [location=join(4499..5407,6033..6653)] [gbkey=CDS]
Sequence

ATGGCGATTTATTCTTCTCTTTTCGACTTAGTTTCATTGCTTCTCTTCTTCTCCTCCTTG
TTTGTTCTAGTTAGACTATGGAGAATATCAAAAACCAGAAACCAAAACAAAAGATTACCT
CCAGGTCCATGGCGACTTCCCTTTATTGGAAGTTTACATCACTTAATTGGAGGAGAACTT
CCACATCGCACTCTTAAAAATTTAGCACAGAAATATGGACCTCTTATGTATTTGCAACTA
GGGCAAGTTCCTACAATAATCATATCATCACCTAGAATTGCAAAAGAAGTTCTTAAAACT
CACGATCTTGCTTTTGCTAATAGGCCACAACTTACATCCTCAACCATCATTTTTTACAAT
AATATAGATATGGTATTTAGCCAATATGGTGACTACTGGAGGCAAATGCGTAAAATTTGT
ATTGTAGAACTTCTTAGCTCAAAGATGGTAAAGTCGTTTAGTGGAATTCGAGAAAAAGAG
CTTTCGAGTCTCATTTCATCAATTCGATCTATGACTGAAGTTAATATAACAGAAAAAATC
TTTATGTTTACCAACTCTGTTACTTGTAGATCAGCCTTTGGAAAAATATGCAAAGATCGA
GGCGAGTTTAGGACACTTTTGAAAGAAGTACTCTTATTAGCAGGAGGATTTTTTGTAGCT
GATTTGTTCCCTTGTTGGAAATTACTTCACAATTTGAGTGGTATGGAATCTAGATTGGTG
AATGCACATCGAAAAGTTGATGAAATTATGGAAAATATAATCAATGAGCATATTGCAAAT
AGAGCAGCTGGGAACAAGAGAAATGGTGAGTTTGGAGATGAAGATTTGGTTGATGTTTTC
CTAAGAATTAAGGAGAAGGACCAACTTCATTTCCCAATCACAAATGGCCATATAAAAGCT
ATGCTTTTTGATATCTTTCTAGGTGGAACTGAAACTTCATCTACAGTTTTAATTTGGGCA
TTGGCAGAATTGATGAAGAACCCAAATGTTATGGCCAAGGCCCAAAGTGAAGTGAGACAA
GTCTTTAAAGGAAAGAAAATATATGATGAAGAAGATAATATTGTTGAAAAGTTATCATAT
TTAAAGTTAGTGATTATGGAAACATTAAGGCTACATACTCCAGCTCCACTTATGGGACCT
AGGGAATGTAGGGAGGAAACTAATATTGCAGGATATAATATACCTAATAAGACCAAAGTA
TTGGTCAATGCATGGGCACTTGCAAGAGATGTTGAAAGTTGGAATGATCCCGAAAGTTTT
ATACCAGAGAGATTTTACAACTCTTCAATTGATTTTATGGGAAATTACTTTGAGTATATT
CCGTTTGGTACAGGAAGAAGGATTTGTCCAGGAATACAATTTGGTTTAGCTAATATTGGA
GTCCCTCTAGCTCAATTGCTCTACAACTTTGAATGGAAACTCCCATATGGAATTAATCCA
CAAGATTTGGATATGACTGAAACACATGGATTAACTGGAGCGAAACAGAATGATCTGTAT
TTAGTTGCTACGTATCGTGAAATTTTTTGA

Peptide Sequence

PEP ID

XP_016457046.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MAIYSSLFDLVSLLLFFSSLFVLVRLWRISKTRNQNKRLPPGPWRLPFIGSLHHLIGGEL
PHRTLKNLAQKYGPLMYLQLGQVPTIIISSPRIAKEVLKTHDLAFANRPQLTSSTIIFYN
NIDMVFSQYGDYWRQMRKICIVELLSSKMVKSFSGIREKELSSLISSIRSMTEVNITEKI
FMFTNSVTCRSAFGKICKDRGEFRTLLKEVLLLAGGFFVADLFPCWKLLHNLSGMESRLV
NAHRKVDEIMENIINEHIANRAAGNKRNGEFGDEDLVDVFLRIKEKDQLHFPITNGHIKA
MLFDIFLGGTETSSTVLIWALAELMKNPNVMAKAQSEVRQVFKGKKIYDEEDNIVEKLSY
LKLVIMETLRLHTPAPLMGPRECREETNIAGYNIPNKTKVLVNAWALARDVESWNDPESF
IPERFYNSSIDFMGNYFEYIPFGTGRRICPGIQFGLANIGVPLAQLLYNFEWKLPYGINP
QDLDMTETHGLTGAKQNDLYLVATYREIF

Transcript Sequence

Gene sequence data has not been registered.